Summary of Embryo EST Project
|
This
table includes the number of ESTs identified in each functional category
from the suspensor and embryo proper library. Functional categories were
assigned based on BLAST homologies to other genes. The e-value cut-off
to consider if a blast hit was significant is 1e-04.
|
| FUNCTION |
EP |
S |
| Metabolism |
4,980 |
19,899 |
| Energy |
3,200 |
12,015 |
| Cell Growth/Division |
691 |
1,993 |
| Transcription |
1,864 |
5,594 |
| Post-transcription |
1,547 |
4,185 |
| Protein Synthesis |
21,724 |
47,512 |
| Protein Destination and Storage |
6,978 |
22,919 |
| Transporters |
2,841 |
9,932 |
| Intracellular Traffic |
1,284 |
5,808 |
| Cell Structure |
3,673 |
11,038 |
| Signal Transduction |
1,460 |
5,491 |
| Disease/Defense |
2,048 |
16,271 |
| Secondary Metabolism |
2,494 |
15,377 |
| Transposons |
18 |
42 |
| Unknown or Unclassified Proteins |
12,731 |
44,982 |
| No Significant Homology to Public Databases |
18,279 |
82,314 |
| Total ESTs |
85,776 |
305,363 |
Abbreviations: EP = Embryo Proper; S = Suspensor
Updated: December 10, 2008