Honors Collegium 70AL: Gene Discovery Laboratory Spring 2009

sponsored by National Science Foundation

Laboratory

HC70AL File Server (Password is required)

Laboratory of Bob Goldberg

National Science Foundation

 

Bioinformatics

National Center for Biotechnology Information (NCBI)

NCBI BLAST Tools

FinchTV 1.4.0 for Mac OS X and for All Windows (DNA sequencing chromatogram trace viewer)

Goldberg Lab DNA Sequence Analysis Database

WebSeq (UCLA Sequencing Facility)

BLAST 2.2.8 In The Arabidopsis Information Resource (TAIR)

Gene Prediction Programs

      Fgenesh

      Genscan

      Eukaryotic GeneMark.hmm

Repeat Finder Programs

      Plant Repeat Databases (Michigan State University)

      RepeatMasker (Institute for Systems Biology)

Unknown Scaffold Sequence from Arabidopsis

Selected Contig Sequences from Scarlet Runner Bean

      Contig02294 (11.3Kb) - First Assignment to Nancy Phang

      contig266405 (23.3Kb) - Second Assignment to Nancy Phang

      Contig02779 (12.8Kb) - First Assignment to Jessica Chen

      contig257429 (28.9Kb) - Second Assignment to Jessica Chen

      Contig68072 (12.5Kb) - First Assignment to Elaine Chiu

      contig232576 (15.1Kb) - Second Assignment to Elaine Chiu

      Contig70611 (21.0Kb) - First Assignment to Max Bachour

      contig17080 (23.0Kb) - Second Assignment to Max Bachour

      Contig70667 (13.8Kb) - First Assignment to Eden Maloney

      contig230613 (18.4Kb) - Second Assignment to Eden Maloney

      Contig78267 (11.5Kb) - First Assignment to Chris McQuilkin

      contig232490 (50.7Kb) - Second Assignment to Chris McQuilkin

 

Journals

Scientific American

 

Plug-Ins

Quicktime

Acrobat Reader